WCB05 - PROGRAM
Workshop on
Constraint Based Methods for Bioinformatics
October 5, 2005, Sitges (Spain)
- 14:50-15:00 Workshop Opening
- 15:00-15:25 Sebastian Will, Anke Busch, and Rolf Backofen.
Efficient Constraint-based Sequence Alignment by Cluster Tree Elimination.
- 15:25-15:50 Marco Zantoni, Emiliano Dalla, Alberto Policriti,
and Claudio Schneider.
Biological constraints for the consensus subsequence problem.
- 15:50-16:15 Luca Bortolussi and Andrea Sgarro.
Constraint Satisfaction Problems over DNA Strings.
- 16:15-16:40 Coffee Break and Discussion
- 16:40-17:05 Maryam Bavarian and Veronica Dahl.
RNA Secondary Structure Design Using Constraint Handling Rules.
- 17:05-17:30 Christine Gaspin, Simon de Givry, Thomas Schiex,
Patricia Thebault,
and Matthias Zytnicki.
A new local consistency for weighted CSP applied to ncRNA detection.
- 17:30-17:55 Gregoire Dooms, Yves Deville, and Pierre Dupont
Constrained metabolic network analysis: discovering pathways using CP(Graph).
- 17:55-18:15 Coffee (Tapas?) Break and Discussion
- 18:15-18:40 Fabien Corblin, Laurent Trilling, and Eric Fanchon
Constraint Logic Programming for modeling a biological system
described by a logical network.
- 18:40-19:05 Simon de Givry, Isabelle Palhiere, Zulma Vitezica, and Thomas Schiex.
Mendelian error detection in complex pedigree using weighted
constraint satisfaction techniques.
- 19:05-19:30 Ingrid Jacquemin and Jacques Nicolas
Disulfide bonds prediction using inductive logic programming.
- 19:30-20:00 Discussion and Greetings
Workshop Proceedings
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